Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8437

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8437: 16805 - K16948 CDC12 cell division control protein 12, at 1226776 to 1229088 16805 mRNA_8438: 16806 - K07910 RAB18 Ras-related protein Rab-18, at 1229197 to 1230748 16806

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,225,887 - -1.4
1,226,415 + 0.3
1,226,450 - 0.5
1,226,563 + -0.1
1,226,572 - -0.5
1,226,718 + -1.1
1,226,737 - 0.1
1,228,111 + 16805 mRNA_8437 0.58 0.3
1,228,752 + 16805 mRNA_8437 0.85 -0.2
1,228,772 - 16805 mRNA_8437 0.86 -0.5
1,229,055 - -0.3
1,229,165 + -0.4
1,229,192 + -0.7
1,229,202 - 1.0
1,229,230 + -1.9
1,229,346 - -1.6
1,229,346 - 0.5
1,229,351 + -0.2
1,229,655 - 16806 mRNA_8438 0.30 -0.5
1,229,656 + 16806 mRNA_8438 0.30 -0.6