Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8401

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8400: 16768 - K12189 VPS25, EAP20 ESCRT-II complex subunit VPS25, at 1129262 to 1130136 16768 mRNA_8401: 16769 - K16315 GSG2 serine/threonine-protein kinase haspin, at 1130370 to 1132967 16769 mRNA_8402: 16770 - K07579 K07579 putative methylase, at 1133086 to 1134230 16770

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
1,129,467 + 16768 mRNA_8400 0.23 -2.2
1,129,476 + 16768 mRNA_8400 0.24 -0.1
1,129,640 - 16768 mRNA_8400 0.43 0.8
1,130,171 - -0.5
1,130,227 - -0.6
1,130,230 + 0.7
1,130,322 - -0.3
1,130,322 - 0.4
1,130,393 + -0.0
1,130,497 - -0.3
1,130,617 + 0.5
1,130,958 + 16769 mRNA_8401 0.23 -1.7
1,131,046 + 16769 mRNA_8401 0.26 -0.5
1,131,111 + 16769 mRNA_8401 0.29 -0.5
1,131,133 - 16769 mRNA_8401 0.29 0.6
1,131,223 + 16769 mRNA_8401 0.33 1.3
1,131,249 - 16769 mRNA_8401 0.34 1.8
1,131,589 + 16769 mRNA_8401 0.47 0.3
1,131,804 - 16769 mRNA_8401 0.55 0.4
1,131,829 - 16769 mRNA_8401 0.56 0.1
1,131,832 + 16769 mRNA_8401 0.56 0.8
1,132,065 - 16769 mRNA_8401 0.65 1.8
1,132,081 - 16769 mRNA_8401 0.66 0.0
1,132,423 - 16769 mRNA_8401 0.79 0.4
1,132,689 - 16769 mRNA_8401 0.89 0.1
1,132,694 + 16769 mRNA_8401 0.89 -0.8
1,132,694 + 16769 mRNA_8401 0.89 -0.9
1,132,760 - -0.7
1,132,863 - 0.8
1,132,988 - 0.1
1,133,103 + 0.6
1,133,123 - -0.6
1,133,131 + -1.5
1,133,150 - 0.4
1,133,165 + 0.0
1,133,167 + -0.7
1,133,189 + 0.3
1,133,398 + 16770 mRNA_8402 0.27 0.5
1,133,400 - 16770 mRNA_8402 0.27 -0.4
1,133,454 + 16770 mRNA_8402 0.32 -0.5
1,133,943 + 16770 mRNA_8402 0.75 0.3
1,133,947 - 16770 mRNA_8402 0.75 0.9