Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8373

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8372: 16740 - KOG1729 FYVE finger containing protein, at 1057653 to 1060208 16740 mRNA_8373: 16741 - KOG0504 FOG Ankyrin repeat, at 1060392 to 1061446 16741 mRNA_8374: 16742 - KOG0053 Cystathionine beta-lyases/cystathionine gamma-synthases, at 1061726 to 1063499 16742

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,059,533 + 16740 mRNA_8372 0.74 0.0
1,059,605 + 16740 mRNA_8372 0.76 0.1
1,059,698 + 16740 mRNA_8372 0.80 -2.0
1,059,763 + 16740 mRNA_8372 0.83 0.5
1,059,917 + 16740 mRNA_8372 0.89 0.5
1,060,044 - -1.0
1,060,257 - 0.1
1,060,371 + -2.3
1,060,631 - 16741 mRNA_8373 0.23 -0.4
1,060,667 + 16741 mRNA_8373 0.26 1.1
1,060,693 + 16741 mRNA_8373 0.29 -0.0
1,061,134 - 16741 mRNA_8373 0.70 0.1
1,061,229 - 16741 mRNA_8373 0.79 -1.9
1,061,230 + 16741 mRNA_8373 0.79 0.4
1,061,233 - 16741 mRNA_8373 0.80 0.2
1,061,233 - 16741 mRNA_8373 0.80 1.5
1,061,376 + -0.5
1,061,397 + 1.4
1,061,688 - 0.2
1,061,706 - 0.2
1,062,286 - 16742 mRNA_8374 0.32 -0.6
1,062,297 + 16742 mRNA_8374 0.32 0.2