Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8332

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8331: 16699 - K02604 ORC2 origin recognition complex subunit 2, at 955011 to 956688 16699 mRNA_8332: 16700 - K10082 LMAN2, VIP36 lectin, mannose-binding 2, at 956796 to 958192 16700 mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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956,354 + 16699 mRNA_8331 0.80 0.6
956,739 - 0.4
956,755 - 0.7
956,763 + 1.6
956,771 - 1.4
956,785 - 0.1
956,879 + -0.1
957,538 + 16700 mRNA_8332 0.53 0.8
957,654 - 16700 mRNA_8332 0.61 0.3
957,795 - 16700 mRNA_8332 0.72 0.6
957,912 + 16700 mRNA_8332 0.80 0.8
957,915 - 16700 mRNA_8332 0.80 1.6
958,060 - 1.1
958,061 + 0.3
958,066 - 0.3
958,087 + 0.8
958,147 - 0.2
958,230 + 0.2
958,231 - 0.7
958,359 - 0.6
958,384 - -0.8
958,385 + -0.3
958,485 - 1.2
958,669 - 0.6
958,670 + -0.2
958,833 + 16701 mRNA_8333 0.15 -0.1
959,139 - 16701 mRNA_8333 0.31 0.1