Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8268

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635 mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809649 to 810847 16636 mRNA_8269: 16637 - Hypothetical Protein, at 810911 to 812187 16637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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809,285 - 0.7
809,286 - 1.8
809,290 - -0.0
809,302 - 0.7
809,342 + -2.1
809,427 - -0.7
809,430 - 1.2
809,474 + 1.0
809,476 - -1.9
810,061 - 16636 mRNA_8268 0.34 -1.6
810,200 - 16636 mRNA_8268 0.46 0.2
810,215 - 16636 mRNA_8268 0.47 -0.0
810,322 - 16636 mRNA_8268 0.56 0.5
810,338 + 16636 mRNA_8268 0.57 -1.9
810,627 - 16636 mRNA_8268 0.82 0.5
810,645 - 16636 mRNA_8268 0.83 1.6
810,650 - 16636 mRNA_8268 0.83 0.9
810,918 + -0.1
811,113 + 16637 mRNA_8269 0.16 -0.5