Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8197

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652238 to 654491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654718 to 655775 16566

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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651,355 - -0.5
651,363 - -0.2
651,367 + -0.1
651,378 - 0.4
651,390 + -1.4
651,517 + -0.0
651,532 - 0.1
651,930 - 0.3
651,945 + -0.2
651,950 + 0.3
652,078 - -0.9
652,378 - -1.3
652,381 + -0.0
652,389 - 0.1
652,398 + 0.3
652,507 - 16565 mRNA_8197 0.12 -0.5
652,673 - 16565 mRNA_8197 0.19 0.0
652,676 + 16565 mRNA_8197 0.19 -1.3
652,680 - 16565 mRNA_8197 0.20 0.4
653,099 + 16565 mRNA_8197 0.38 -1.1
653,158 + 16565 mRNA_8197 0.41 0.0
653,870 + 16565 mRNA_8197 0.72 0.2
654,270 - -1.9
654,283 - 0.4
654,573 - 1.2
654,578 + 0.1
654,578 + 1.2
654,726 + -0.2
654,737 - -0.8
654,743 - -1.0
654,745 + 0.4
655,018 + 16566 mRNA_8198 0.28 -0.5
655,024 - 16566 mRNA_8198 0.29 -0.3
655,181 - 16566 mRNA_8198 0.44 -0.5