Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8106

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8105: 16473 - Hypothetical Protein, at 424921 to 425494 16473 mRNA_8106: 16474 - K13511 TAZ monolysocardiolipin acyltransferase, at 425625 to 426745 16474 mRNA_8107: 16475 - K01937 pyrG, CTPS CTP synthase, at 427104 to 429524 16475

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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424,626 - -0.7
424,660 - -0.5
424,660 - -0.9
424,676 + -0.0
424,692 + 0.5
424,698 + 2.2
424,700 - 1.4
424,709 - 0.2
424,714 - -0.2
424,721 - 0.8
424,732 + -0.8
424,733 + -1.6
424,739 + -0.2
424,750 - -0.5
424,751 + -0.5
424,753 + 0.6
424,755 - 0.4
424,756 + 0.9
424,757 + 0.1
424,761 - 0.0
424,762 + 0.0
424,764 + 0.0
424,768 + 1.0
424,772 + -0.1
424,775 - -0.5
424,795 - 1.0
424,812 + 0.0
424,829 + 0.1
424,847 - 0.7
424,848 - 1.1
424,892 + 0.9
424,899 + 0.2
424,906 + 0.0
424,910 - -0.6
424,913 + 0.0
424,918 - 1.1
424,952 + -0.0
424,971 - 1.0
425,036 + 16473 mRNA_8105 0.20 0.1
425,039 + 16473 mRNA_8105 0.21 1.0
425,117 + 16473 mRNA_8105 0.34 1.9
425,175 + 16473 mRNA_8105 0.44 0.7
425,194 + 16473 mRNA_8105 0.48 0.2
425,194 - 16473 mRNA_8105 0.48 -0.4
425,199 - 16473 mRNA_8105 0.48 0.2
425,202 - 16473 mRNA_8105 0.49 -0.6
425,218 + 16473 mRNA_8105 0.52 -0.3
425,246 - 16473 mRNA_8105 0.57 0.4
425,308 - 16473 mRNA_8105 0.67 1.2
425,341 - 16473 mRNA_8105 0.73 0.1
425,343 - 16473 mRNA_8105 0.74 -0.4
425,368 - 16473 mRNA_8105 0.78 -0.5
425,378 - 16473 mRNA_8105 0.80 1.5
425,385 + 16473 mRNA_8105 0.81 0.4
425,419 - 16473 mRNA_8105 0.87 0.0
425,426 - 16473 mRNA_8105 0.88 -0.0
425,497 - 0.3
425,512 - -1.6
425,527 + -1.1
425,528 + 0.4
425,572 + -0.8
425,620 - 0.4
425,699 - -0.5
425,701 - -1.1
425,709 + 0.2
425,719 + -1.1
425,741 - 16474 mRNA_8106 0.10 -1.2
425,752 - 16474 mRNA_8106 0.11 -1.2
425,801 + 16474 mRNA_8106 0.16 0.3
425,832 + 16474 mRNA_8106 0.18 -0.8
425,833 - 16474 mRNA_8106 0.19 -0.1
425,896 + 16474 mRNA_8106 0.24 0.7
425,903 + 16474 mRNA_8106 0.25 -0.5
426,041 + 16474 mRNA_8106 0.37 0.4
426,058 + 16474 mRNA_8106 0.39 -0.8
426,179 + 16474 mRNA_8106 0.49 0.7
426,642 - 1.4
426,643 + 1.7
426,795 + -0.2
426,797 - 0.1
426,797 + -0.3
426,808 + -0.1