Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8103

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8102: 16470 - Hypothetical Protein, at 420636 to 421256 16470 mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421864 to 423445 16471 mRNA_8104: 16472 - Hypothetical Protein, at 423504 to 424497 16472

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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420,866 - 16470 mRNA_8102 0.37 1.0
421,191 + 16470 mRNA_8102 0.89 -1.6
421,327 + -1.2
421,593 + 1.7
421,597 - -0.6
421,598 + -0.4
421,607 - -0.3
421,630 + -1.6
421,630 - 0.6
421,762 - -0.9
421,769 - -0.7
421,883 - 0.8
421,886 - -0.0
421,905 - -1.2
422,026 - 16471 mRNA_8103 0.10 -0.4
422,190 - 16471 mRNA_8103 0.21 0.2
422,524 + 16471 mRNA_8103 0.42 1.8
422,607 - 16471 mRNA_8103 0.47 -1.3
422,619 + 16471 mRNA_8103 0.48 0.1
422,628 - 16471 mRNA_8103 0.48 0.3
422,924 + 16471 mRNA_8103 0.67 -0.6
423,069 + 16471 mRNA_8103 0.76 -0.9
423,214 - 16471 mRNA_8103 0.85 -0.1
423,349 + 0.5
423,384 + -0.4
423,494 - 0.9
423,499 - -1.1
423,502 - -0.8
423,668 - 16472 mRNA_8104 0.16 0.8
423,692 + 16472 mRNA_8104 0.19 0.1
423,856 - 16472 mRNA_8104 0.35 -0.1
423,994 - 16472 mRNA_8104 0.49 -0.1
424,408 + 0.3