Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8090

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8089: 16457 - Hypothetical Protein, at 393616 to 394916 16457 mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395084 to 397372 16458 mRNA_8091: 16459 - K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase, at 397502 to 399447 16459

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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394,405 - 16457 mRNA_8089 0.61 -0.2
394,408 - 16457 mRNA_8089 0.61 0.6
394,697 + 16457 mRNA_8089 0.83 -0.2
394,745 - 16457 mRNA_8089 0.87 -0.5
394,833 + -0.2
394,969 - 0.1
394,970 - -0.0
394,976 - 0.0
395,114 + 0.2
395,162 + -0.6
395,406 - 16458 mRNA_8090 0.14 0.7
395,566 - 16458 mRNA_8090 0.21 -0.9
395,834 + 16458 mRNA_8090 0.33 1.5
395,861 - 16458 mRNA_8090 0.34 0.2
396,128 - 16458 mRNA_8090 0.46 0.0
396,326 - 16458 mRNA_8090 0.54 1.5
396,381 - 16458 mRNA_8090 0.57 -0.3
396,435 + 16458 mRNA_8090 0.59 1.7
397,444 - 0.6
398,040 - 16459 mRNA_8091 0.28 -0.1