Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8031

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250044 to 251923 16398 mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252207 to 252830 16399 mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253423 to 257120 16400

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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251,219 - 16398 mRNA_8030 0.62 -1.4
251,252 - 16398 mRNA_8030 0.64 -0.6
251,413 + 16398 mRNA_8030 0.73 -1.3
251,628 - 16398 mRNA_8030 0.84 -0.4
251,672 - 16398 mRNA_8030 0.87 -1.3
251,822 - 0.7
251,830 - -0.4
251,857 - -1.1
251,941 - -0.5
251,955 - 0.2
251,956 - -0.4
251,964 - -0.6
251,966 + 0.2
251,968 + 0.3
251,980 + -0.3
252,280 + 16399 mRNA_8031 0.12 1.7
252,280 + 16399 mRNA_8031 0.12 -1.0
252,414 + 16399 mRNA_8031 0.33 0.1
252,601 - 16399 mRNA_8031 0.63 -0.4
252,854 + -0.7
252,864 + -0.8
253,030 + -0.4
253,146 - 1.0
253,148 - 0.4
253,295 + -0.4
253,307 - -1.9
253,313 + -0.1
253,473 + 0.2