Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7999

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7998: 16366 - KOG3156 Uncharacterized membrane protein, at 176627 to 177709 16366 mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177844 to 179868 16367 mRNA_8000: 16368 - K08991 MUS81 crossover junction endonuclease MUS81, at 180086 to 183760 16368

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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176,903 + 16366 mRNA_7998 0.25 1.6
177,761 - 0.7
177,769 - -0.0
177,779 + -0.1
177,902 + -1.1
177,923 + 0.0
177,925 + 0.3
178,211 + 16367 mRNA_7999 0.18 -1.1
178,929 + 16367 mRNA_7999 0.54 -0.1
179,762 - 1.6
179,880 - -0.5
180,114 - 0.5
180,169 - -0.4
180,226 + 0.4
180,384 - -0.7
180,549 + 16368 mRNA_8000 0.13 0.4
180,724 + 16368 mRNA_8000 0.17 -0.2
180,757 + 16368 mRNA_8000 0.18 -0.3
180,858 - 16368 mRNA_8000 0.21 -1.5