Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7978

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7977: 16345 - K17757 CARKD ATP-dependent NAD(P)H-hydrate dehydratase, at 134234 to 135920 16345 mRNA_7978: 16346 - K13341 PEX7, PTS2R peroxin-7, at 136245 to 137738 16346 mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137884 to 138763 16347

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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135,439 + 16345 mRNA_7977 0.71 -0.3
135,469 + 16345 mRNA_7977 0.73 -0.8
136,191 + -1.0
136,197 + 0.5
136,354 + -0.0
136,527 - 16346 mRNA_7978 0.19 0.8
136,792 + 16346 mRNA_7978 0.37 0.5
137,045 - 16346 mRNA_7978 0.54 -0.1
137,253 + 16346 mRNA_7978 0.67 -0.7
137,370 - 16346 mRNA_7978 0.75 -0.0
137,523 + 16346 mRNA_7978 0.86 -1.7
137,529 + 16346 mRNA_7978 0.86 0.9
137,817 - 0.2
138,045 + 16347 mRNA_7979 0.18 1.1