Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7973

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7972: 16340 - Hypothetical Protein, at 120428 to 122131 16340 mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122692 to 128410 16341 mRNA_7974: 16342 - Hypothetical Protein, at 128673 to 129137 16342

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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121,948 - 16340 mRNA_7972 0.89 -1.7
121,949 - 16340 mRNA_7972 0.89 -0.1
122,110 - -0.7
122,152 + -0.1
122,172 - 0.1
122,408 + 2.6
122,503 - -0.7
122,524 - 0.9
122,702 + -0.9
122,714 - -0.0
123,107 - -0.4
123,383 - 16341 mRNA_7973 0.12 1.3
123,406 - 16341 mRNA_7973 0.12 -0.2
123,427 - 16341 mRNA_7973 0.13 0.9
123,427 + 16341 mRNA_7973 0.13 -0.4
123,607 + 16341 mRNA_7973 0.16 -1.0
123,771 + 16341 mRNA_7973 0.19 -0.1
123,974 - 16341 mRNA_7973 0.22 -0.6
123,999 + 16341 mRNA_7973 0.23 -1.6
124,077 + 16341 mRNA_7973 0.24 -1.7
124,294 - 16341 mRNA_7973 0.28 0.9
124,411 - 16341 mRNA_7973 0.30 0.9
124,690 - 16341 mRNA_7973 0.35 -0.0
124,744 - 16341 mRNA_7973 0.36 0.2
124,774 + 16341 mRNA_7973 0.36 -0.3
124,878 + 16341 mRNA_7973 0.38 -0.3
124,962 + 16341 mRNA_7973 0.40 -1.7
125,189 - 16341 mRNA_7973 0.44 1.0
125,217 + 16341 mRNA_7973 0.44 -0.8
125,415 - 16341 mRNA_7973 0.48 0.2
125,425 + 16341 mRNA_7973 0.48 0.0
125,425 - 16341 mRNA_7973 0.48 -1.2
125,943 - 16341 mRNA_7973 0.57 0.7
126,330 + 16341 mRNA_7973 0.64 -0.2
126,371 - 16341 mRNA_7973 0.64 -1.8
127,016 - 16341 mRNA_7973 0.76 -1.6
127,157 - 16341 mRNA_7973 0.78 0.7
128,185 - -1.6
128,281 - -0.8
128,321 + -0.6
128,321 + 0.4
128,574 - 1.2
128,574 + -1.0
128,575 + 1.0
128,575 + -0.2
128,575 + -1.2
128,581 + 0.9
128,587 - 0.6
128,598 + -0.7
128,598 - -1.1
128,603 + -0.5
128,603 + -0.8
128,609 + 0.4
128,609 + 0.4
128,614 + -0.2
128,714 + 0.3
128,722 - 16342 mRNA_7974 0.11 0.4
128,872 - 16342 mRNA_7974 0.43 -1.6
128,877 + 16342 mRNA_7974 0.44 -0.8
128,897 - 16342 mRNA_7974 0.48 0.1
129,203 + 0.3
129,230 - 1.0
129,307 - -0.0
129,309 + 0.6
129,309 + 1.6
129,312 - -0.1
129,320 - -0.4
129,338 + 1.4