Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7952

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79808 to 82314 16319 mRNA_7952: 16320 - KOG0627 Heat shock transcription factor, at 82566 to 84687 16320

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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81,693 + 16319 mRNA_7951 0.75 -0.9
81,831 + 16319 mRNA_7951 0.81 1.2
82,009 + 16319 mRNA_7951 0.88 -1.1
82,091 + 0.7
82,124 + 0.0
82,124 + 0.2
82,228 + -0.0
82,317 - -0.1
82,547 + 0.2
82,592 - -0.3
82,721 - 0.5
83,236 - 16320 mRNA_7952 0.32 0.0
83,237 + 16320 mRNA_7952 0.32 1.0
83,416 + 16320 mRNA_7952 0.40 -3.1
83,582 + 16320 mRNA_7952 0.48 -1.7
83,583 + 16320 mRNA_7952 0.48 1.0
83,596 + 16320 mRNA_7952 0.49 0.0
83,713 - 16320 mRNA_7952 0.54 0.6
83,836 + 16320 mRNA_7952 0.60 -0.3
83,892 + 16320 mRNA_7952 0.62 0.5
84,150 - 16320 mRNA_7952 0.75 0.1
84,151 + 16320 mRNA_7952 0.75 0.8
84,324 - 16320 mRNA_7952 0.83 -2.2
84,449 + 16320 mRNA_7952 0.89 0.9
84,595 + 1.1
84,860 - 0.2
85,155 - 0.2
85,172 + 0.1
85,284 + -0.2
85,297 + 0.2
85,466 + -0.6
85,614 - -0.0
85,619 - -0.3
85,627 + 0.9
85,652 + 1.1
85,656 + -0.6