Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7922

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25144 to 26524 16289 mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27039 to 30180 16290 mRNA_7923: 16291 - Hypothetical Protein, at 30690 to 33001 16291

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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26,278 + 16289 mRNA_7921 0.82 -0.3
26,518 - 0.4
26,523 + -0.1
26,527 + 2.5
26,531 - 0.7
26,558 - -0.6
26,650 - 0.0
26,674 - 0.1
26,676 - 0.5
26,681 - -1.1
26,683 + -0.4
26,696 + 0.1
26,697 - -0.0
26,702 + 0.1
26,713 + 0.6
26,840 - 2.0
26,842 - 0.5
26,844 - -0.9
26,847 + -0.4
26,849 - -3.0
26,851 + -0.5
26,852 - 0.2
26,856 + -0.4
26,873 - -0.5
26,896 + -0.2
26,902 + -0.9
27,132 - -0.4
28,022 - 16290 mRNA_7922 0.31 -1.9
28,527 + 16290 mRNA_7922 0.47 -1.3
28,556 + 16290 mRNA_7922 0.48 -2.5
28,865 + 16290 mRNA_7922 0.58 -3.3
28,911 + 16290 mRNA_7922 0.60 -0.1
29,218 - 16290 mRNA_7922 0.69 -1.3
29,574 + 16290 mRNA_7922 0.81 -0.7
29,672 - 16290 mRNA_7922 0.84 0.8
29,952 - -2.4
30,041 + -3.5
30,157 - -1.1
30,188 - 1.3
30,218 + 0.2
30,640 + -0.9
30,643 - 0.3
30,662 - -0.1
30,680 + 0.0
30,800 + 2.3
30,812 - 0.2
30,813 + -0.3
30,954 + 16291 mRNA_7923 0.11 0.1
30,962 + 16291 mRNA_7923 0.12 0.3
31,047 - 16291 mRNA_7923 0.15 -1.1
31,062 - 16291 mRNA_7923 0.16 0.2
31,064 - 16291 mRNA_7923 0.16 -0.0
31,065 + 16291 mRNA_7923 0.16 1.5
31,068 + 16291 mRNA_7923 0.16 0.9
31,068 - 16291 mRNA_7923 0.16 1.0
31,072 + 16291 mRNA_7923 0.17 0.9
31,084 + 16291 mRNA_7923 0.17 0.7
31,143 - 16291 mRNA_7923 0.20 0.3
31,150 + 16291 mRNA_7923 0.20 -0.3