Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7915

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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11,145 + 0.2
11,292 - 0.1
11,303 - 1.8
11,307 - 0.9
11,309 - -0.9
11,310 + -0.1
11,314 + 0.1
11,323 + -0.4
11,342 - 0.2
11,431 + 1.6
11,437 - -0.8
11,461 - 0.6
11,465 - 0.9
11,475 + -0.1
11,482 - 0.1
11,482 - -0.5
11,483 + -0.1
11,484 + 0.9
11,486 - -1.1
11,486 - 0.2
11,486 - 0.3
11,487 - 0.6
11,489 - -0.1
11,494 + 0.9
11,494 - 0.1
11,495 + 0.1
11,497 + 1.1
11,500 - -0.6
11,501 - -0.5
11,503 - 0.4
11,503 - -0.6
11,503 - 0.5
11,505 - -0.2
11,506 + 0.8
11,506 + -0.4
11,506 + 1.7
11,512 + 0.4
11,513 - -0.8
11,513 - -0.4
11,524 - -0.9
11,525 - -2.1
11,527 + -0.4
11,527 - 0.2
11,529 - -0.2
11,529 - 1.2
11,530 - 0.8
11,530 + -0.7
11,532 + 0.8
11,540 + -0.1
11,547 + -0.6
11,549 + -0.5
11,557 + -1.2
11,557 + -0.3
11,557 + 1.1
11,561 - 0.6
11,573 - 0.1
11,586 - -0.1
11,589 + 0.3
11,591 + 0.0
11,596 + -0.4
11,609 + 0.4
11,620 + -0.9
11,646 - -0.0
11,649 - 1.0
11,651 - -0.4
11,654 + 0.5
11,656 - -0.4
11,671 - 0.1
11,674 + 0.2
11,676 + -0.1
11,680 + 0.7
11,684 + 0.2
11,684 - 0.2
11,696 - 0.6
11,696 + -0.6
11,704 - -0.2
11,709 - 0.1
11,709 - 0.1
11,710 + 0.5
11,710 + -1.0
11,715 - -0.3
11,721 + -0.3
11,724 - -0.7
11,724 - 0.2
11,734 - -1.7
11,755 - 1.8
11,766 + -0.1
11,767 + -1.1
11,768 - 0.9
11,778 - -1.3
11,779 + 1.6
11,792 - 0.9
11,904 + -0.1
11,915 + 2.3
11,922 + 0.1
11,923 - -0.4
11,931 + -0.0
11,938 - 1.7
12,072 + -0.7
12,180 + -0.5
12,330 - 0.1
12,410 - 16283 mRNA_7915 0.13 0.5
12,645 - 16283 mRNA_7915 0.24 -0.3
12,767 - 16283 mRNA_7915 0.29 0.1
12,784 + 16283 mRNA_7915 0.30 1.0
13,198 - 16283 mRNA_7915 0.49 -0.5
13,417 + 16283 mRNA_7915 0.59 -1.1
13,504 - 16283 mRNA_7915 0.63 0.6
13,509 + 16283 mRNA_7915 0.64 -0.3
13,533 + 16283 mRNA_7915 0.65 -2.4
13,950 - 16283 mRNA_7915 0.84 0.1
13,953 + 16283 mRNA_7915 0.84 0.5
14,353 - 0.2
14,370 - 0.1
14,410 + -0.3
14,532 - 0.1
14,689 + -0.9
14,696 - -0.1
14,836 - 16284 mRNA_7916 0.12 0.3
14,843 + 16284 mRNA_7916 0.12 0.4