Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7696

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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857,961 - -0.3
857,963 - -0.5
858,060 - -0.5
858,071 - -0.1
858,073 + -0.5
858,074 - -1.6
858,082 - 0.6
858,529 + -0.0
858,667 - -0.3
858,740 + 0.4
858,921 + 1.0
859,097 - -1.0
859,401 + 16064 mRNA_7696 0.14 0.8
860,107 - 16064 mRNA_7696 0.36 0.4
860,120 - 16064 mRNA_7696 0.36 -0.3
860,126 + 16064 mRNA_7696 0.36 -0.5
860,729 + 16064 mRNA_7696 0.55 -0.1
860,736 - 16064 mRNA_7696 0.55 -0.4
860,921 + 16064 mRNA_7696 0.61 0.2
861,005 + 16064 mRNA_7696 0.63 1.0
861,008 + 16064 mRNA_7696 0.63 0.7
861,263 + 16064 mRNA_7696 0.71 0.2
861,299 - 16064 mRNA_7696 0.72 0.2
861,310 + 16064 mRNA_7696 0.73 -1.5
861,541 + 16064 mRNA_7696 0.80 -1.0
861,592 - 16064 mRNA_7696 0.81 -0.1
862,328 - -0.2
862,369 + -0.7
862,372 - -0.3
862,393 - 0.1
862,603 + -0.2
862,674 - 16065 mRNA_7697 0.15 -0.1
862,835 - 16065 mRNA_7697 0.26 0.2
862,855 + 16065 mRNA_7697 0.28 -0.7
862,856 - 16065 mRNA_7697 0.28 0.5
862,857 + 16065 mRNA_7697 0.28 -0.4
863,128 + 16065 mRNA_7697 0.47 0.4