Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7666

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7665: 16033 - K13119 FAM50, XAP5 protein FAM50, at 796446 to 798090 16033 mRNA_7666: 16034 - K20184 VPS41 vacuolar protein sorting-associated protein 41, at 798298 to 802330 16034 mRNA_7667: 16035 - Hypothetical Protein, at 802474 to 802850 16035 mRNA_7668: 16036 - K18042 STYX serine/threonine/tyrosine-interacting protein, at 803269 to 804354 16036

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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798,243 - -0.3
798,244 - 0.5
798,247 - -0.5
798,386 - -0.9
800,843 - 16034 mRNA_7666 0.63 0.2
801,845 - 16034 mRNA_7666 0.88 0.8
801,903 + 16034 mRNA_7666 0.89 -0.8
802,011 + 0.1
802,045 + -0.4
802,047 + 0.6
802,050 + 0.1
802,057 - -1.5
802,169 - -0.1
802,182 + -0.5
802,658 + 16035 mRNA_7667 0.49 0.4
802,776 - 16035 mRNA_7667 0.80 0.4
802,783 - 16035 mRNA_7667 0.82 -0.0
802,903 - -0.6
802,942 + 0.4
802,975 - 0.1
803,100 - -0.8