Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7631

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715585 to 720215 15997 mRNA_7630: 15998 - K11353 NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13, at 720321 to 721070 15998 mRNA_7631: 15999 - KOG0226 RNA-binding proteins, at 721192 to 722141 15999 mRNA_7632: 16000 - KOG0383 Predicted helicase, at 722943 to 730457 16000

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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720,237 + -0.7
720,348 - 0.8
721,102 + -0.6
721,113 - -0.6
721,113 - -0.6
721,124 + 0.9
721,133 - -0.7
721,136 + -1.3
721,146 - -1.0
721,258 + -0.7
721,438 - 15999 mRNA_7631 0.26 -1.0
722,113 + -0.1
722,151 + -0.2
722,160 + -0.1
722,301 + 0.8
722,410 - 0.5
722,575 - 0.0
722,704 - -0.3
722,773 - 0.3
722,828 - 0.3
722,866 + -0.4