Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7602

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656888 to 658260 15969 mRNA_7602: 15970 - Hypothetical Protein, at 658581 to 659564 15970 mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660276 to 661317 15971

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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658,050 + 15969 mRNA_7601 0.85 -0.2
658,150 + 0.8
658,188 + 0.5
658,301 - 0.9
658,316 - -0.0
658,324 - -0.2
658,325 - 0.4
658,332 + 1.8
658,336 + -0.3
658,338 - -1.1
658,342 + 0.9
658,527 + 0.1
658,643 + -0.2
658,655 + 0.6
658,753 + 15970 mRNA_7602 0.17 -0.0
658,774 - 15970 mRNA_7602 0.20 1.5
658,781 + 15970 mRNA_7602 0.20 -0.1
658,787 + 15970 mRNA_7602 0.21 0.1
658,920 + 15970 mRNA_7602 0.34 0.0
659,071 - 15970 mRNA_7602 0.50 -2.4
659,507 - -0.5
659,647 + 0.1
659,946 + 0.1
659,954 + -0.2
659,955 - 0.1
659,965 + 0.4
660,012 + -0.2
660,012 + -0.8
660,099 + 0.4
660,100 - -0.2
660,123 + -0.8
660,280 + 0.4
660,562 - 15971 mRNA_7603 0.27 0.4