Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7559

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561272 to 563698 15926 mRNA_7559: 15927 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 563948 to 564897 15927 mRNA_7560: 15928 - K12346 SMF metal iron transporter, at 565306 to 568103 15928

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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563,313 - 15926 mRNA_7558 0.84 0.3
563,452 - 15926 mRNA_7558 0.90 -0.7
563,585 + -0.0
563,597 + 0.2
563,607 + 0.3
563,609 + 0.6
563,611 + 0.5
563,638 - -1.6
563,723 - 0.0
563,743 + -1.4
563,744 + 0.3
563,747 - 1.0
563,766 + -0.6
563,767 + -0.0
563,770 + 1.5
563,872 + -0.9
564,056 + 15927 mRNA_7559 0.11 0.1
564,184 - 15927 mRNA_7559 0.25 -1.2
564,192 - 15927 mRNA_7559 0.26 -2.0
564,194 + 15927 mRNA_7559 0.26 0.1
564,211 + 15927 mRNA_7559 0.28 -0.7
564,219 - 15927 mRNA_7559 0.29 -0.7
564,333 + 15927 mRNA_7559 0.41 0.4
564,484 + 15927 mRNA_7559 0.56 0.2
564,636 - 15927 mRNA_7559 0.72 1.6
564,667 + 15927 mRNA_7559 0.76 -0.5
564,802 + 15927 mRNA_7559 0.90 0.2
564,919 + -0.2
565,075 - 0.7
565,082 + -1.0
565,083 - 1.9