Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7533

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7532: 15900 - K01896 ACSM medium-chain acyl-CoA synthetase, at 505603 to 507822 15900 mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507910 to 511338 15901 mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511662 to 512740 15902

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
507,139 - 15900 mRNA_7532 0.69 0.3
507,450 - 15900 mRNA_7532 0.83 -0.2
508,026 + 0.1
508,225 - -0.5
508,552 - 15901 mRNA_7533 0.19 -2.2
508,608 - 15901 mRNA_7533 0.20 -0.6
508,940 - 15901 mRNA_7533 0.30 -0.2
509,724 - 15901 mRNA_7533 0.53 0.1
509,806 + 15901 mRNA_7533 0.55 3.1
509,819 - 15901 mRNA_7533 0.56 0.2
509,981 + 15901 mRNA_7533 0.60 0.0
510,384 + 15901 mRNA_7533 0.72 2.9
510,822 - 15901 mRNA_7533 0.85 0.6
510,977 - 15901 mRNA_7533 0.89 -0.3
511,246 - -0.7
511,260 - -0.4
511,396 + 0.4
511,415 + -1.7
511,425 + 1.3
511,550 - 0.7
511,566 + -1.2
511,708 + -0.5
511,845 - 15902 mRNA_7534 0.17 0.8
511,849 + 15902 mRNA_7534 0.17 -0.1
511,850 - 15902 mRNA_7534 0.17 0.3
512,001 + 15902 mRNA_7534 0.31 0.1
512,013 - 15902 mRNA_7534 0.33 0.6
512,013 + 15902 mRNA_7534 0.33 1.4
512,128 - 15902 mRNA_7534 0.43 0.0
512,255 + 15902 mRNA_7534 0.55 -1.0
512,295 - 15902 mRNA_7534 0.59 -0.8