Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7495

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425956 to 427400 15863 mRNA_7496: 15864 - K03935 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, at 427998 to 430216 15864

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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425,014 - 15862 mRNA_7494 0.78 0.0
425,014 - 15862 mRNA_7494 0.78 0.8
425,187 + 15862 mRNA_7494 0.87 0.8
425,203 - 15862 mRNA_7494 0.88 0.7
425,219 - 15862 mRNA_7494 0.89 0.1
425,223 - 15862 mRNA_7494 0.89 -0.5
425,330 - -1.0
425,371 + -1.1
425,475 + 0.5
425,491 - -1.0
425,493 - -0.7
425,497 - -0.0
425,634 - -0.9
425,816 + -0.2
426,653 + 15863 mRNA_7495 0.48 -0.3
426,709 - 15863 mRNA_7495 0.52 -1.2
426,808 - 15863 mRNA_7495 0.59 -0.4
427,263 - -0.0
427,276 + 0.3
427,403 - 1.0
427,414 + -0.2
427,414 - -0.7
427,501 - 1.7
427,560 - -0.4
427,563 - 0.1
427,784 + -0.1
427,872 + 0.1
427,877 - -0.4
427,898 + 0.8
428,006 + -0.6
428,012 + -0.3
428,015 + 0.1
428,042 + -0.4