Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7490

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7489: 15857 - K12351 SMPD2 sphingomyelin phosphodiesterase 2, at 408031 to 409638 15857 mRNA_7490: 15858 - K20167 TBC1D14 TBC1 domain family member 14, at 409726 to 411732 15858 mRNA_7491: 15859 - K19267 qorB NAD(P)H dehydrogenase (quinone), at 411819 to 412834 15859

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
408,908 - 15857 mRNA_7489 0.55 0.8
409,011 - 15857 mRNA_7489 0.61 1.1
409,089 + 15857 mRNA_7489 0.66 -1.2
409,231 + 15857 mRNA_7489 0.75 -0.0
409,386 - 15857 mRNA_7489 0.84 2.1
409,501 + 1.4
409,502 + 1.3
409,503 - -2.6
409,507 - 0.5
409,653 - 0.1
409,665 - -1.2
409,669 - -0.2
409,669 + -0.2
409,772 + 0.5
409,803 - 2.3
409,954 + 15858 mRNA_7490 0.11 -0.6
410,091 - 15858 mRNA_7490 0.18 0.8
410,124 - 15858 mRNA_7490 0.20 0.3
410,276 + 15858 mRNA_7490 0.27 0.6
410,675 - 15858 mRNA_7490 0.47 1.7
410,858 + 15858 mRNA_7490 0.56 -2.0
411,007 - 15858 mRNA_7490 0.64 0.2
411,143 + 15858 mRNA_7490 0.71 -0.2
411,566 - 0.5
411,739 + -0.6
411,748 - 0.5
411,765 - 0.0
411,871 - -1.5
411,895 + -0.7
412,000 - 15859 mRNA_7491 0.18 -0.3
412,034 + 15859 mRNA_7491 0.21 -0.3
412,036 - 15859 mRNA_7491 0.21 0.9
412,037 + 15859 mRNA_7491 0.21 -0.3
412,195 + 15859 mRNA_7491 0.37 -0.4
412,195 + 15859 mRNA_7491 0.37 -0.1
412,195 + 15859 mRNA_7491 0.37 -1.2
412,200 - 15859 mRNA_7491 0.38 -0.1
412,461 + 15859 mRNA_7491 0.63 -0.1
412,481 - 15859 mRNA_7491 0.65 -0.5