Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7417

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7416: 15784 - Hypothetical Protein, at 227635 to 230239 15784 mRNA_7417: 15785 - K03353 APC6, CDC16 anaphase-promoting complex subunit 6, at 230745 to 233451 15785 mRNA_7418: 15786 - Hypothetical Protein, at 234371 to 235150 15786

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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229,880 - 15784 mRNA_7416 0.86 0.4
230,042 + 0.0
230,047 + 1.0
230,178 - 0.5
230,185 + -0.6
230,468 - -1.3
230,477 - 0.3
230,478 - -0.7
230,489 + -0.2
230,491 - -0.5
230,499 - -1.6
230,779 - -0.2
231,080 - 15785 mRNA_7417 0.12 0.3
233,172 - 15785 mRNA_7417 0.90 -0.3
233,445 + -0.6
233,723 + -0.4
233,741 - -0.9
233,817 - 0.4
233,817 + 0.2
233,828 - -0.5
233,855 + 0.6
234,012 + 0.4
234,158 + -0.3
234,254 - 1.3
234,280 + -0.1
234,283 + -0.1
234,300 - -0.2
234,305 + -0.2
234,321 + 1.2
234,326 + -2.0
234,342 - 0.6
234,344 + 0.5
234,369 + -0.5