Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7386

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7385: 15753 - ProSiteProfiles-Ubiquitin-interacting motif (UIM) repeat profile.-PS50330, at 154422 to 157963 15753 mRNA_7386: 15754 - HMMPfam-F-box-like-PF12937, at 158123 to 159294 15754 mRNA_7387: 15755 - Hypothetical Protein, at 159588 to 160374 15755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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157,199 + 15753 mRNA_7385 0.78 0.0
157,295 - 15753 mRNA_7385 0.81 -1.0
157,296 + 15753 mRNA_7385 0.81 0.2
157,487 + 15753 mRNA_7385 0.87 0.7
157,652 + -0.6
157,742 - 0.1
157,862 - 0.2
158,223 - 1.6
158,329 + 15754 mRNA_7386 0.18 0.6
158,333 - 15754 mRNA_7386 0.18 0.1
158,399 - 15754 mRNA_7386 0.24 -0.1
158,492 + 15754 mRNA_7386 0.31 0.2
158,496 - 15754 mRNA_7386 0.32 -0.4
158,508 + 15754 mRNA_7386 0.33 1.9
159,659 + -1.0
159,699 - 15755 mRNA_7387 0.14 -0.2
159,932 - 15755 mRNA_7387 0.44 -0.2