Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7370

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738 mRNA_7371: 15739 - Hypothetical Protein, at 113683 to 115680 15739

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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111,886 - 15737 mRNA_7369 0.63 -0.7
112,057 - 15737 mRNA_7369 0.78 0.1
112,217 - 0.2
112,221 + -1.3
112,231 + -0.5
112,232 - -1.4
112,234 + -1.2
112,243 + 0.5
112,359 + -0.5
112,364 - -0.3
112,368 + 0.3
112,370 + -0.8
112,374 + -0.3
112,382 + 0.4
112,394 + 0.9
112,399 + -0.3
113,297 - 15738 mRNA_7370 0.78 0.3
113,415 - 0.5
113,851 - 0.6
113,987 + 15739 mRNA_7371 0.15 1.0
114,100 - 15739 mRNA_7371 0.21 -0.5
114,144 + 15739 mRNA_7371 0.23 -0.3
114,287 + 15739 mRNA_7371 0.30 -1.2