Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7369

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7368: 15736 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 107448 to 110616 15736 mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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110,272 + 15736 mRNA_7368 0.89 0.3
110,411 - 0.6
110,411 - -0.0
110,573 + 0.1
110,688 + -0.7
110,708 + -0.4
110,727 + -0.0
110,728 - -0.6
110,731 + -0.3
110,743 + -0.5
110,745 - 0.2
110,747 - 0.1
110,750 + -0.3
110,750 - 0.2
110,755 + -0.2
110,757 + 0.9
110,763 + -0.1
110,764 + -0.0
110,851 - -0.1
110,878 - -0.6
110,886 - 0.2
110,892 - 0.4
110,904 + 1.0
110,904 + -1.0
110,905 - -0.9
110,929 - -0.5
110,945 - 0.0
110,949 - -0.6
110,950 + -0.3
110,958 + 0.1
110,979 - 0.4
111,011 - -0.2
111,022 + -0.3
111,023 - 0.0
111,034 + 0.1
111,040 - 0.2
111,178 - -0.1
111,225 + -0.6
111,886 - 15737 mRNA_7369 0.63 -0.7
112,057 - 15737 mRNA_7369 0.78 0.1
112,217 - 0.2
112,221 + -1.3
112,231 + -0.5
112,232 - -1.4
112,234 + -1.2
112,243 + 0.5
112,359 + -0.5
112,364 - -0.3
112,368 + 0.3
112,370 + -0.8
112,374 + -0.3
112,382 + 0.4
112,394 + 0.9
112,399 + -0.3
113,297 - 15738 mRNA_7370 0.78 0.3