Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7306

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7305: 15673 - Hypothetical Protein, at 1355275 to 1355712 15673 mRNA_7306: 15674 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 1356547 to 1358907 15674 mRNA_7307: 15675 - Hypothetical Protein, at 1359048 to 1360624 15675

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,355,587 + 15673 mRNA_7305 0.71 1.3
1,355,591 + 15673 mRNA_7305 0.72 -0.8
1,355,603 - 15673 mRNA_7305 0.75 -0.8
1,355,614 - 15673 mRNA_7305 0.77 -0.1
1,355,619 - 15673 mRNA_7305 0.79 -0.7
1,355,620 + 15673 mRNA_7305 0.79 0.1
1,355,630 - 15673 mRNA_7305 0.81 0.1
1,355,741 - -1.1
1,355,863 + -2.4
1,356,030 - 0.3
1,356,064 - -0.6
1,356,068 + 0.8
1,356,087 + 2.9
1,356,168 + -0.6
1,356,180 - 1.4
1,356,186 + -0.7
1,356,199 + -0.1
1,356,235 - -0.5
1,356,318 + -1.1
1,356,554 + -1.0
1,356,577 + 1.3
1,356,616 + 0.4
1,356,755 + 0.6
1,356,765 - -0.8
1,356,978 + 15674 mRNA_7306 0.18 0.1
1,356,980 + 15674 mRNA_7306 0.18 0.1
1,357,111 + 15674 mRNA_7306 0.24 -0.3
1,357,383 - 15674 mRNA_7306 0.35 1.0
1,357,518 + 15674 mRNA_7306 0.41 0.7
1,357,825 + 15674 mRNA_7306 0.54 0.8
1,358,106 + 15674 mRNA_7306 0.66 1.1
1,358,232 - 15674 mRNA_7306 0.71 0.0
1,358,526 - 15674 mRNA_7306 0.84 0.3
1,358,644 + 15674 mRNA_7306 0.89 0.0
1,358,682 - -0.2
1,358,837 + -1.3
1,358,842 - 0.5
1,358,844 + 0.5
1,358,970 - 0.6
1,358,975 - 0.2
1,359,193 - -0.4
1,359,194 + 1.7
1,359,287 + 15675 mRNA_7307 0.15 -0.5
1,359,853 - 15675 mRNA_7307 0.51 0.1