Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7250

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7249: 15617 - Hypothetical Protein, at 1217873 to 1218626 15617 mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1218970 to 1220341 15618 mRNA_7251: 15619 - Hypothetical Protein, at 1220664 to 1222024 15619

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,218,028 + 15617 mRNA_7249 0.21 -0.4
1,218,473 - 15617 mRNA_7249 0.80 -1.2
1,218,888 - -0.1
1,218,912 + -0.2
1,218,915 - 0.8
1,219,055 + -0.4
1,219,071 - -0.4
1,219,211 + 15618 mRNA_7250 0.18 -0.1
1,219,243 + 15618 mRNA_7250 0.20 0.4
1,219,247 - 15618 mRNA_7250 0.20 0.6
1,219,248 + 15618 mRNA_7250 0.20 -0.2
1,219,248 + 15618 mRNA_7250 0.20 0.8
1,219,336 - 15618 mRNA_7250 0.27 -0.0
1,219,361 - 15618 mRNA_7250 0.28 -0.1
1,219,373 + 15618 mRNA_7250 0.29 -1.0
1,219,451 + 15618 mRNA_7250 0.35 0.2
1,219,465 + 15618 mRNA_7250 0.36 2.1
1,219,497 + 15618 mRNA_7250 0.38 -1.0
1,219,549 - 15618 mRNA_7250 0.42 -0.2
1,219,639 - 15618 mRNA_7250 0.49 -0.1
1,219,647 - 15618 mRNA_7250 0.49 -1.0
1,219,737 - 15618 mRNA_7250 0.56 -0.1
1,219,941 + 15618 mRNA_7250 0.71 0.5
1,220,072 - 15618 mRNA_7250 0.80 1.1
1,220,149 + 15618 mRNA_7250 0.86 1.2
1,220,160 - 15618 mRNA_7250 0.87 1.3
1,220,193 - 15618 mRNA_7250 0.89 -1.1
1,220,193 - 15618 mRNA_7250 0.89 -1.0
1,220,194 + 15618 mRNA_7250 0.89 -1.0
1,220,199 + 15618 mRNA_7250 0.90 -0.3
1,220,199 + 15618 mRNA_7250 0.90 0.4
1,220,205 + -0.6
1,220,331 + -0.4
1,220,360 + -0.6
1,220,374 + 0.2
1,220,377 - 0.7
1,220,626 - 0.9
1,220,673 - 1.5
1,220,816 + 15619 mRNA_7251 0.11 -1.3
1,220,938 + 15619 mRNA_7251 0.20 -0.1
1,220,950 + 15619 mRNA_7251 0.21 -1.1
1,220,956 - 15619 mRNA_7251 0.21 1.4
1,220,956 - 15619 mRNA_7251 0.21 -0.0
1,221,264 + 15619 mRNA_7251 0.44 -0.3
1,221,338 - 15619 mRNA_7251 0.50 -0.4