Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7230

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7229: 15597 - Hypothetical Protein, at 1180715 to 1181387 15597 mRNA_7230: 15598 - K07019 K07019 uncharacterized protein, at 1181628 to 1183243 15598 mRNA_7231: 15599 - Hypothetical Protein, at 1183430 to 1185124 15599

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,180,742 + -0.2
1,180,925 + 15597 mRNA_7229 0.31 0.8
1,181,640 - 1.1
1,181,827 + 15598 mRNA_7230 0.12 0.1
1,182,389 - 15598 mRNA_7230 0.47 0.1
1,182,832 - 15598 mRNA_7230 0.75 -0.2
1,182,839 + 15598 mRNA_7230 0.75 0.1
1,182,851 - 15598 mRNA_7230 0.76 -0.7
1,182,995 - 15598 mRNA_7230 0.85 -0.5
1,182,998 + 15598 mRNA_7230 0.85 0.4
1,183,013 + 15598 mRNA_7230 0.86 -1.3
1,183,131 - -0.1
1,183,148 - 0.3
1,183,155 + 0.6
1,183,161 + -0.9
1,183,281 - 0.8
1,183,292 + 0.2
1,183,294 + -1.3
1,183,299 + -0.1
1,183,300 - -0.2
1,183,308 - -0.4
1,183,308 - 0.2
1,183,310 - -0.7
1,183,313 + -1.3
1,183,317 + -1.6
1,183,325 + -0.3
1,183,348 + -0.2
1,183,479 + 0.8
1,183,503 + -0.9
1,183,582 - -1.2
1,183,598 - -0.7
1,183,912 + 15599 mRNA_7231 0.28 0.2
1,184,032 - 15599 mRNA_7231 0.36 0.1
1,184,178 + 15599 mRNA_7231 0.44 0.0
1,184,206 + 15599 mRNA_7231 0.46 -0.1