Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7210

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7209: 15577 - K01408 IDE, ide insulysin, at 1127911 to 1131746 15577 mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1132597 to 1139005 15578

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,131,642 - -0.2
1,131,662 - 0.3
1,131,688 - -1.4
1,131,792 - 0.7
1,131,857 + -0.9
1,131,947 - -0.7
1,131,953 - -0.0
1,131,959 + -0.4
1,131,965 - 0.9
1,131,965 + -0.1
1,132,125 - -1.3
1,132,133 + 0.5
1,132,136 + 0.1
1,132,140 - -0.8
1,132,143 + -0.3
1,132,150 + 0.9
1,132,152 + 1.0
1,132,161 - -0.6
1,132,170 + -0.2
1,132,180 + -0.4
1,132,180 + -0.8
1,132,189 - 0.5
1,132,209 - 1.3
1,132,274 - -0.4
1,132,308 + 0.1
1,132,350 - 0.5
1,132,350 - -1.3
1,132,357 + 1.5
1,132,550 + 0.3
1,133,075 - 0.5
1,133,083 - -0.0
1,133,086 + 0.5
1,133,089 + 1.4
1,133,093 - -0.1
1,133,130 + 0.6
1,133,544 + 15578 mRNA_7210 0.15 0.2
1,133,663 + 15578 mRNA_7210 0.17 -0.6
1,133,732 - 15578 mRNA_7210 0.18 -0.6
1,133,809 - 15578 mRNA_7210 0.19 -1.2
1,134,731 + 15578 mRNA_7210 0.33 -0.2
1,134,849 - 15578 mRNA_7210 0.35 0.1
1,135,011 - 15578 mRNA_7210 0.38 -0.7
1,135,413 - 15578 mRNA_7210 0.44 0.2
1,135,570 - 15578 mRNA_7210 0.46 -0.7
1,135,716 + 15578 mRNA_7210 0.49 -0.5
1,135,868 - 15578 mRNA_7210 0.51 -0.9
1,136,025 - 15578 mRNA_7210 0.53 0.0
1,136,037 + 15578 mRNA_7210 0.54 0.9
1,136,129 + 15578 mRNA_7210 0.55 0.1
1,136,147 + 15578 mRNA_7210 0.55 -1.3
1,136,184 - 15578 mRNA_7210 0.56 1.2
1,136,187 + 15578 mRNA_7210 0.56 1.3
1,136,454 + 15578 mRNA_7210 0.60 0.2
1,136,510 + 15578 mRNA_7210 0.61 0.7
1,136,726 - 15578 mRNA_7210 0.64 -0.1
1,136,749 - 15578 mRNA_7210 0.65 0.5
1,136,783 - 15578 mRNA_7210 0.65 -0.4
1,136,885 + 15578 mRNA_7210 0.67 0.8
1,136,912 + 15578 mRNA_7210 0.67 0.0
1,137,051 - 15578 mRNA_7210 0.69 0.7
1,137,057 - 15578 mRNA_7210 0.70 0.2
1,138,562 + 0.3
1,138,610 + 0.1
1,138,653 - -0.1
1,139,420 - -0.2
1,139,526 - 1.2
1,139,540 + 0.5
1,139,542 - -0.1
1,139,545 - -0.8
1,139,594 - -0.4
1,139,693 - -0.8
1,139,708 - -0.0
1,139,708 + -0.2
1,139,708 - 0.1
1,139,751 + 0.1
1,139,826 - 0.4
1,139,873 + 0.7
1,139,978 - 0.3
1,139,988 - 2.5