Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7144

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984352 to 987514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988436 to 990722 15512 mRNA_7145: 15513 - BLAST putative ccch zinc finger dna binding protein [Eu..., at 991165 to 992673 15513

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
987,791 - -0.1
987,800 + 1.5
987,922 + -0.5
988,061 - 1.7
988,070 + -0.6
988,083 - 1.4
988,194 - 0.8
988,202 + 1.4
988,211 - 0.6
988,219 + 0.1
988,606 - 0.5
989,094 - 15512 mRNA_7144 0.29 -0.2
989,721 + 15512 mRNA_7144 0.56 0.4
990,289 + 15512 mRNA_7144 0.81 1.0
990,447 - 15512 mRNA_7144 0.88 0.1
990,595 + -0.2
990,867 - -0.3
990,963 + 0.3
991,313 + 0.2
991,525 + 15513 mRNA_7145 0.24 0.5