Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7107

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899228 to 903559 15476

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
896,481 - 15474 mRNA_7106 0.52 -1.5
896,628 - 15474 mRNA_7106 0.62 -1.1
897,104 + 0.0
897,359 - 0.2
897,367 + 0.0
897,376 + 0.4
897,398 - -0.2
897,496 - 0.6
897,641 - 15475 mRNA_7107 0.13 -0.2
897,921 - 15475 mRNA_7107 0.30 0.4
898,355 - 15475 mRNA_7107 0.56 1.0
898,923 - 15475 mRNA_7107 0.90 1.1
899,064 - -0.4
899,208 + 0.5
899,315 + 0.4
899,383 - -0.1
899,498 - -0.8
899,551 - 0.5
899,897 + 15476 mRNA_7108 0.15 -0.2
899,928 - 15476 mRNA_7108 0.16 0.1