Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7061

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786976 to 788620 15428 mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789472 to 792234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792528 to 793710 15430

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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788,490 - 0.2
788,516 + -0.2
788,636 - 0.1
788,664 + 2.2
788,815 - -0.3
788,816 - -0.0
788,935 + -0.9
789,086 - -1.6
789,087 - -0.2
789,108 + 0.3
789,811 + 15429 mRNA_7061 0.12 -0.6
789,874 - 15429 mRNA_7061 0.15 1.1
790,137 + 15429 mRNA_7061 0.24 0.2
790,215 - 15429 mRNA_7061 0.27 0.5
790,403 - 15429 mRNA_7061 0.34 0.4
790,986 - 15429 mRNA_7061 0.55 -0.2
791,453 - 15429 mRNA_7061 0.72 2.0
791,699 - 15429 mRNA_7061 0.81 -0.5
791,728 - 15429 mRNA_7061 0.82 -0.6
791,906 - 15429 mRNA_7061 0.88 0.5
792,025 + 0.3
792,155 - 1.1
792,179 + -0.3
792,331 + -0.7
792,333 - -0.2
792,340 - 0.7
792,344 - 1.2
792,349 + -0.7
792,507 + 0.4
792,630 - 0.4
792,634 + -0.7
792,941 - 15430 mRNA_7062 0.35 -0.2
792,957 + 15430 mRNA_7062 0.36 -1.0
793,128 + 15430 mRNA_7062 0.51 -0.5
793,221 - 15430 mRNA_7062 0.59 0.5