Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7037

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7036: 15404 - K00831 serC, PSAT1 phosphoserine aminotransferase, at 721038 to 722425 15404 mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722546 to 724803 15405 mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725352 to 729605 15406

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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722,452 - -0.6
722,564 - -0.8
722,723 - -0.5
722,882 - 15405 mRNA_7037 0.15 -0.8
723,074 - 15405 mRNA_7037 0.23 -0.0
723,620 - 15405 mRNA_7037 0.48 1.2
724,045 - 15405 mRNA_7037 0.66 -0.1
724,155 - 15405 mRNA_7037 0.71 1.7
724,514 - 15405 mRNA_7037 0.87 0.8
724,780 + -0.6
724,793 - -0.5
725,147 + 0.1
725,267 - 0.5
725,286 - -0.7
725,427 + 0.1
725,516 - -0.2
725,803 - 15406 mRNA_7038 0.11 -0.2