Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6854

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6853: 15221 - Interpro Altered inheritance of mitochondria 5, at 279894 to 280567 15221 mRNA_6854: 15222 - K16219 NTMT1, METTL11A, NTM1 protein N-terminal methyltransferase, at 280873 to 281900 15222 mRNA_6855: 15223 - KOG1601 GATA-4/5/6 transcription factors, at 282233 to 283773 15223

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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280,076 + 15221 mRNA_6853 0.27 -0.1
280,083 - 15221 mRNA_6853 0.28 -0.8
280,325 - 15221 mRNA_6853 0.64 -0.2
280,326 - 15221 mRNA_6853 0.64 -0.2
280,328 - 15221 mRNA_6853 0.64 0.9
280,344 + 15221 mRNA_6853 0.67 0.0
280,433 - 15221 mRNA_6853 0.80 -0.6
280,477 - 15221 mRNA_6853 0.86 -0.6
280,490 - 15221 mRNA_6853 0.88 -0.8
280,634 + -0.2
280,786 + -0.3
281,198 + 15222 mRNA_6854 0.32 -0.2
281,238 + 15222 mRNA_6854 0.36 0.1
281,254 - 15222 mRNA_6854 0.37 -0.3
281,300 - 15222 mRNA_6854 0.42 0.2
281,341 + 15222 mRNA_6854 0.46 -0.2
281,483 + 15222 mRNA_6854 0.59 -0.9
281,527 - 15222 mRNA_6854 0.64 -0.4
281,687 + 15222 mRNA_6854 0.79 0.0
281,779 - 15222 mRNA_6854 0.88 -0.3
281,797 + 15222 mRNA_6854 0.90 0.6
281,933 + 1.4
281,941 + -0.6
282,192 - 1.2
282,338 + 2.8
282,372 - -1.4
282,378 + -0.8
282,390 + 15223 mRNA_6855 0.10 -2.1