Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6758

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68694 to 73091 15125 mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73895 to 75434 15126 mRNA_6759: 15127 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 75828 to 77290 15127

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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73,181 - 1.5
73,299 + -0.3
73,409 - -1.0
73,410 - -0.3
73,415 + -0.4
73,422 + 0.9
73,422 + 1.2
73,466 + -0.1
73,544 + 0.1
73,554 - -0.6
73,555 + -0.4
73,567 - -0.1
74,126 - 15126 mRNA_6758 0.15 1.2
74,126 - 15126 mRNA_6758 0.15 0.6
74,259 - 15126 mRNA_6758 0.24 -0.2
74,282 + 15126 mRNA_6758 0.25 -0.1
74,379 - 15126 mRNA_6758 0.31 2.1
74,454 - 15126 mRNA_6758 0.36 0.1
74,482 + 15126 mRNA_6758 0.38 0.5
74,641 + 15126 mRNA_6758 0.48 0.6
74,896 + 15126 mRNA_6758 0.65 0.1
75,284 - -0.6
75,313 + 0.2
75,316 - -1.2
75,460 + -0.8
75,463 - -0.1
75,695 - 1.1
75,742 - 0.5
75,751 + -0.1
75,751 - -0.7
75,770 + -0.3
75,907 - -0.1
75,915 + 1.5
76,065 + 15127 mRNA_6759 0.16 -2.1
76,087 - 15127 mRNA_6759 0.18 0.2
76,105 + 15127 mRNA_6759 0.19 -1.2
76,158 + 15127 mRNA_6759 0.23 -1.5
76,192 - 15127 mRNA_6759 0.25 1.7
76,207 + 15127 mRNA_6759 0.26 0.5
76,224 - 15127 mRNA_6759 0.27 0.5