Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6757

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6756: 15124 - K02906 RP-L3, MRPL3, rplC large subunit ribosomal protein L3, at 67016 to 68273 15124 mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68694 to 73091 15125 mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73895 to 75434 15126

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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68,334 + -0.2
68,431 - -0.2
68,439 + 0.2
68,462 - -0.8
68,464 + 0.9
68,474 - -0.1
68,479 + -0.9
68,480 - -0.9
68,480 - -0.3
68,483 + -0.1
68,486 + 0.9
68,489 + -0.2
68,493 + 0.8
68,499 + -0.2
68,636 + -1.2
69,086 - -1.8
72,552 + 15125 mRNA_6757 0.88 -0.1
73,181 - 1.5
73,299 + -0.3
73,409 - -1.0
73,410 - -0.3
73,415 + -0.4
73,422 + 0.9
73,422 + 1.2
73,466 + -0.1
73,544 + 0.1
73,554 - -0.6
73,555 + -0.4
73,567 - -0.1