Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6735

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6734: 15102 - Hypothetical Protein, at 21925 to 24629 15102 mRNA_6735: 15103 - Hypothetical Protein, at 24942 to 26366 15103 mRNA_6736: 15104 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 26533 to 28608 15104

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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23,952 - 15102 mRNA_6734 0.75 0.5
24,244 + 15102 mRNA_6734 0.86 -0.1
24,266 - 15102 mRNA_6734 0.87 0.8
24,529 - -0.2
24,538 + 0.3
24,673 - 0.8
24,701 - 0.1
24,701 - -0.8
24,702 + 1.6
24,709 - 0.9
24,722 - 0.2
24,746 - -1.6
24,749 - 1.0
24,799 - -0.4
24,825 - 0.5
24,826 + 0.0
24,852 - 0.2
24,855 - 1.1
24,894 - 0.5
24,908 - -0.4
24,984 + -0.3
24,994 + -0.0
25,126 - 15103 mRNA_6735 0.13 0.2
25,144 - 15103 mRNA_6735 0.14 1.7
25,146 - 15103 mRNA_6735 0.14 1.2
25,148 - 15103 mRNA_6735 0.14 0.8
25,209 + 15103 mRNA_6735 0.19 -0.7
25,286 - 15103 mRNA_6735 0.24 1.6
25,297 + 15103 mRNA_6735 0.25 0.1
25,313 - 15103 mRNA_6735 0.26 1.9
25,428 - 15103 mRNA_6735 0.34 -0.1
25,445 - 15103 mRNA_6735 0.35 0.4
25,468 + 15103 mRNA_6735 0.37 1.0
25,636 + 15103 mRNA_6735 0.49 0.8
25,745 - 15103 mRNA_6735 0.56 1.5
25,750 + 15103 mRNA_6735 0.57 0.0
25,864 + 15103 mRNA_6735 0.65 0.2
25,871 - 15103 mRNA_6735 0.65 -1.5
25,912 + 15103 mRNA_6735 0.68 -0.1
26,056 + 15103 mRNA_6735 0.78 -0.6
26,301 + -0.7
26,330 + 0.8
26,504 + -0.7
26,531 + 0.6
26,534 - 0.7
26,588 - 0.2
26,629 + 0.7
26,646 + -0.1
26,751 - 15104 mRNA_6736 0.11 -0.0
26,781 - 15104 mRNA_6736 0.12 -1.1
26,927 - 15104 mRNA_6736 0.19 -0.5
27,128 + 15104 mRNA_6736 0.29 -0.7