Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6680

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6679: 15047 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 1424590 to 1427114 15047 mRNA_6680: 15048 - K11430 EZH2 histone-lysine N-methyltransferase EZH2, at 1427504 to 1431076 15048 mRNA_6681: 15049 - Hypothetical Protein, at 1431812 to 1432661 15049

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,426,804 - 15047 mRNA_6679 0.88 -1.2
1,427,052 + 0.7
1,427,176 - 0.7
1,427,199 + 0.6
1,427,336 + -0.3
1,427,345 - -0.1
1,427,345 + 0.7
1,427,381 + -0.1
1,427,390 - 0.0
1,427,396 - 1.3
1,427,405 - 0.6
1,427,568 - -0.6
1,428,211 + 15048 mRNA_6680 0.20 0.2
1,428,351 + 15048 mRNA_6680 0.24 -0.0
1,428,803 + 15048 mRNA_6680 0.36 -0.1
1,429,063 - 15048 mRNA_6680 0.44 -1.4
1,429,370 + 15048 mRNA_6680 0.52 0.8
1,429,540 - 15048 mRNA_6680 0.57 -1.1
1,429,798 + 15048 mRNA_6680 0.64 -3.1
1,429,893 - 15048 mRNA_6680 0.67 -0.8
1,429,909 + 15048 mRNA_6680 0.67 -0.6
1,429,952 + 15048 mRNA_6680 0.69 0.4
1,430,336 - 15048 mRNA_6680 0.79 0.3
1,430,341 - 15048 mRNA_6680 0.79 -0.3
1,430,655 - 15048 mRNA_6680 0.88 -0.2
1,431,075 - -0.3
1,431,092 + -0.2
1,431,102 + 0.3
1,431,244 - 0.5
1,431,247 - -0.1
1,431,251 + 0.1
1,431,391 - -0.4
1,431,391 + -0.6
1,431,401 + -0.1
1,431,671 + -0.3
1,431,823 - 0.4
1,431,836 - -1.2
1,431,975 - 15049 mRNA_6681 0.19 0.5
1,431,993 + 15049 mRNA_6681 0.21 0.6
1,431,994 - 15049 mRNA_6681 0.21 -0.1