Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6678

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6677: 15045 - Hypothetical Protein, at 1421176 to 1421967 15045 mRNA_6678: 15046 - KOG2533 Permease of the major facilitator superfamily, at 1422360 to 1424349 15046 mRNA_6679: 15047 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 1424590 to 1427114 15047

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,421,601 + 15045 mRNA_6677 0.54 -0.9
1,421,820 + 15045 mRNA_6677 0.81 0.3
1,422,164 - 0.2
1,422,287 + -1.2
1,422,749 - 15046 mRNA_6678 0.20 0.2
1,422,762 + 15046 mRNA_6678 0.20 -0.2
1,424,036 + 15046 mRNA_6678 0.84 -0.2
1,424,048 - 15046 mRNA_6678 0.85 -1.7
1,424,801 - -0.3
1,424,914 - 15047 mRNA_6679 0.13 0.5
1,425,103 - 15047 mRNA_6679 0.20 -0.8
1,425,234 + 15047 mRNA_6679 0.26 -0.5