Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6522

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6521: 14889 - K14788 NOL10, ENP2 ribosome biogenesis protein ENP2, at 989346 to 992026 14889 mRNA_6522: 14890 - K19871 SALL sal-like protein, at 992279 to 994205 14890

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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991,729 + 14889 mRNA_6521 0.89 -1.8
992,009 - -0.2
992,021 - -0.8
992,115 + 0.5
992,132 + 0.1
992,133 + -0.4
992,159 + 0.4
992,205 + -0.1
992,246 - -0.1
992,319 + 1.8
992,477 + 14890 mRNA_6522 0.10 0.1
992,770 - 14890 mRNA_6522 0.25 0.5
992,771 + 14890 mRNA_6522 0.26 0.0
992,780 - 14890 mRNA_6522 0.26 0.1
992,851 + 14890 mRNA_6522 0.30 -0.5
992,939 - 14890 mRNA_6522 0.34 1.4
993,903 - 14890 mRNA_6522 0.84 0.7
993,948 - 14890 mRNA_6522 0.87 0.3
993,994 + 14890 mRNA_6522 0.89 -1.0
994,112 + -0.9
994,136 - 0.9
994,198 + 0.5
994,232 + -0.4
994,261 - -0.6
994,262 + 1.9
994,276 - -0.1
994,286 - 1.4
994,286 - 1.1
994,295 - 0.8
994,297 + 0.3
994,298 + -1.0
994,302 + -0.1
994,305 + 0.6
994,337 - 1.6
994,446 + -0.0
994,467 - -0.7
994,468 - -0.1
994,468 + -0.2
994,469 - -1.8
994,480 + -0.5
994,496 + -0.5
994,499 - 0.2
994,508 + 0.1
994,617 + 0.4
994,618 - -0.7
994,626 - 0.3
994,629 - 1.1
994,631 - -0.0
994,644 - 1.6
994,651 + 2.1
994,657 + 0.1
994,665 + 0.6
994,728 - -0.2
994,733 + -1.1
994,738 - -0.9
994,874 - -0.1
994,892 + 0.0
994,934 + 1.4
994,952 + 0.0
994,955 - 0.4
994,959 - 0.3
994,969 + 0.1
994,975 + 1.9
994,976 - -0.3
994,976 + 0.2
994,976 + -0.7
995,147 + 1.6
995,160 - -0.4