Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6472

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866226 to 867912 14839 mRNA_6472: 14840 - Hypothetical Protein, at 868009 to 868986 14840 mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869282 to 871336 14841

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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867,029 - 14839 mRNA_6471 0.48 1.6
867,626 - 14839 mRNA_6471 0.83 0.0
867,637 + 14839 mRNA_6471 0.84 0.3
867,693 + 14839 mRNA_6471 0.87 -0.4
868,035 + 0.1
868,248 - 14840 mRNA_6472 0.24 -0.7
868,387 - 14840 mRNA_6472 0.39 0.9
868,461 + 14840 mRNA_6472 0.46 0.4
868,470 - 14840 mRNA_6472 0.47 -0.1
868,794 - 14840 mRNA_6472 0.80 0.1
868,894 - -0.0
869,057 - 0.9
869,074 + -0.4
869,086 - -1.1
869,215 - -0.2
869,382 + -0.5
869,831 - 14841 mRNA_6473 0.27 1.2
869,941 - 14841 mRNA_6473 0.32 0.2