Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6452

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819 mRNA_6452: 14820 - Hypothetical Protein, at 825555 to 826689 14820 mRNA_6453: 14821 - K03801 lipB lipoyl(octanoyl) transferase, at 827236 to 828223 14821

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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824,664 - 14819 mRNA_6451 0.80 -0.6
824,750 + 14819 mRNA_6451 0.86 0.3
824,765 - 14819 mRNA_6451 0.87 -0.5
825,032 + 0.6
825,034 - -1.7
825,037 + -0.5
825,041 - -0.4
825,044 + -0.2
825,129 - -1.0
825,206 + 0.2
825,213 + 0.2
825,223 - 2.1
825,328 + -0.0
825,345 + -1.7
825,345 + -1.1
825,397 - 1.7
825,510 + 0.9
825,510 - 0.4
825,552 - 0.4
825,632 + 0.5
825,665 - 0.1
825,754 - 14820 mRNA_6452 0.18 0.3
825,782 + 14820 mRNA_6452 0.20 -0.1
825,901 + 14820 mRNA_6452 0.30 0.2
825,908 - 14820 mRNA_6452 0.31 -0.5
825,937 - 14820 mRNA_6452 0.34 -0.4
825,974 + 14820 mRNA_6452 0.37 -0.6
826,131 + 14820 mRNA_6452 0.51 -0.3
826,194 + 14820 mRNA_6452 0.56 0.2
826,243 + 14820 mRNA_6452 0.61 0.5
826,499 - 14820 mRNA_6452 0.83 0.5
826,507 - 14820 mRNA_6452 0.84 -1.4
826,678 - 1.5
827,009 - -0.1
827,017 + 0.9
827,276 + -0.3
827,291 - -0.9