Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6393

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6392: 14760 - KOG4533 Uncharacterized conserved protein, at 704609 to 706220 14760 mRNA_6393: 14761 - KOG3823 Uncharacterized conserved protein, at 706440 to 709966 14761 mRNA_6394: 14762 - HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235, at 710467 to 712891 14762

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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705,728 + 14760 mRNA_6392 0.69 0.6
705,887 + 14760 mRNA_6392 0.79 -0.6
705,901 - 14760 mRNA_6392 0.80 -0.3
705,904 + 14760 mRNA_6392 0.80 -0.9
705,908 - 14760 mRNA_6392 0.81 0.4
705,950 + 14760 mRNA_6392 0.83 -0.0
706,022 + 14760 mRNA_6392 0.88 -0.1
706,073 - -0.2
706,116 + 0.4
706,224 + -0.8
706,348 - -1.2
706,349 - 0.6
706,354 - 0.2
706,366 + 1.0
706,375 - -0.1
706,380 - 0.5
706,381 + -0.0
706,381 + 0.7
706,383 + 0.2
706,392 + -0.4
706,417 - 0.1
706,434 + 0.4
706,676 + -0.0
706,683 + -0.0
706,961 + 14761 mRNA_6393 0.15 -0.1
706,963 - 14761 mRNA_6393 0.15 1.1
706,965 + 14761 mRNA_6393 0.15 -1.0
707,098 + 14761 mRNA_6393 0.19 0.1
707,394 - 14761 mRNA_6393 0.27 0.2
707,398 + 14761 mRNA_6393 0.27 -0.2
707,483 + 14761 mRNA_6393 0.30 0.4
707,549 - 14761 mRNA_6393 0.31 0.3
707,847 - 14761 mRNA_6393 0.40 0.4
708,018 - 14761 mRNA_6393 0.45 0.1
708,136 - 14761 mRNA_6393 0.48 -0.8
708,308 + 14761 mRNA_6393 0.53 -0.5
708,405 + 14761 mRNA_6393 0.56 0.0
708,405 + 14761 mRNA_6393 0.56 0.4
708,479 + 14761 mRNA_6393 0.58 -0.1
708,602 + 14761 mRNA_6393 0.61 0.1
708,680 - 14761 mRNA_6393 0.64 -1.8
708,704 + 14761 mRNA_6393 0.64 -0.4
709,159 - 14761 mRNA_6393 0.77 -2.5
709,167 + 14761 mRNA_6393 0.77 -0.2
709,491 - 14761 mRNA_6393 0.87 1.3
709,496 + 14761 mRNA_6393 0.87 0.2
709,776 + -0.1
709,800 - -0.1
710,025 - -0.4
710,148 - -1.0
710,178 - -0.5
710,178 + -0.3
710,189 - 0.4
710,201 + 0.1
710,231 - -0.2
710,373 + -0.4
710,504 - 0.7
710,608 - -0.6
710,633 + -0.4
710,635 + 0.4
710,640 - 0.4
710,738 + 14762 mRNA_6394 0.11 -0.6
710,800 - 14762 mRNA_6394 0.14 0.5
710,854 + 14762 mRNA_6394 0.16 -1.4
710,921 - 14762 mRNA_6394 0.19 1.0
710,922 + 14762 mRNA_6394 0.19 0.6
710,933 + 14762 mRNA_6394 0.19 0.2
710,934 - 14762 mRNA_6394 0.19 0.3