Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6330

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6329: 14697 - BLAST clp1-like protein [Moniliophthora roreri MCA 2997], at 559094 to 560421 14697 mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560667 to 562112 14698 mRNA_6331: 14699 - Hypothetical Protein, at 562963 to 566521 14699

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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559,794 - 14697 mRNA_6329 0.53 0.4
559,819 - 14697 mRNA_6329 0.55 0.3
559,850 + 14697 mRNA_6329 0.57 1.7
559,968 - 14697 mRNA_6329 0.66 -0.1
560,291 - -0.6
560,413 + 0.3
560,453 + -1.6
560,464 + 0.8
560,541 + -0.8
561,135 - 14698 mRNA_6330 0.32 -0.6
561,182 - 14698 mRNA_6330 0.36 0.6
561,184 - 14698 mRNA_6330 0.36 -0.9
561,189 - 14698 mRNA_6330 0.36 0.3
561,311 + 14698 mRNA_6330 0.45 0.4
561,327 - 14698 mRNA_6330 0.46 1.4
561,812 + 14698 mRNA_6330 0.79 -0.2
561,898 + 14698 mRNA_6330 0.85 0.4
562,063 + -0.0
562,152 + -0.8
562,175 + -0.4
562,287 - 0.2
562,314 - 1.3
562,321 + 0.2
562,328 - 1.0
562,407 - 0.4
562,467 - -0.3
562,471 + -0.5
562,477 + -0.2
562,480 - 0.0
562,484 - -0.0
562,491 + -1.2
562,496 - -2.1
562,497 + -0.2
562,501 + 0.1
562,503 - -0.3
562,507 + -0.8
562,507 + 0.0
562,511 + -0.0
562,518 + -0.3
562,617 - -0.2
562,619 + 0.2
562,622 - 0.4
562,623 + -0.2
562,624 + -0.6
562,624 + -0.8
562,632 + 0.1
562,633 + -1.1
562,640 - 0.4
562,641 - -1.2
562,646 + 0.7
562,658 + -0.2
562,927 - -1.3
562,932 - -1.1
562,932 - -0.0
562,933 + 0.2
562,942 - 0.1
562,955 + -0.1
563,107 - 1.1