Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6327

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554507 to 555774 14694 mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555929 to 557274 14695 mRNA_6328: 14696 - Hypothetical Protein, at 558019 to 558735 14696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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555,351 + 14694 mRNA_6326 0.67 0.5
555,364 - 14694 mRNA_6326 0.68 0.3
555,668 + 0.1
555,679 - -0.1
555,813 + 0.4
555,827 + -0.2
555,844 + -0.8
555,855 - -0.4
555,878 + 0.2
556,083 + 14695 mRNA_6327 0.11 -0.8
556,095 - 14695 mRNA_6327 0.12 0.5
556,380 + 14695 mRNA_6327 0.34 0.5
556,687 + 14695 mRNA_6327 0.56 0.1
557,226 - 0.4
557,251 + 0.2
557,266 - -0.9
557,284 - -0.4
557,379 + 0.1
557,382 - 0.3
557,401 - -1.9
557,402 - 0.1
557,402 + -0.3
557,410 - -0.5
557,412 - -1.3
557,414 - 0.3
557,419 + -1.3
557,419 + -0.1
557,423 + -0.0
557,454 + 1.5
557,543 - -1.0
557,547 - -0.3
557,554 - -0.3
557,555 - -0.3
557,556 - -0.2
557,560 - -1.2
557,568 + 0.3
557,575 + -1.1
557,575 + 0.3
557,594 + 0.2
557,594 + 0.7
557,669 + -0.8
557,671 - -0.6
557,673 + 0.2
557,686 + 0.1
557,688 - -0.8
557,689 - 1.0
557,690 - -1.8
557,690 - -0.3
557,694 - -1.0
557,695 - 0.6
557,700 + -0.8
557,700 + -0.8
557,704 + 0.7
557,707 + -0.6
557,709 - 0.2
557,710 - -0.2
557,713 + -0.0
557,719 - -1.2
557,739 - -0.4
557,749 + -0.1
557,752 - 0.4
557,753 + 0.2
557,755 - 1.1
557,757 - -0.6
557,793 + 0.3
557,901 - 0.8
558,036 - 0.5
558,043 + 0.3
558,045 + -0.4
558,055 + 1.4
558,096 - 14696 mRNA_6328 0.11 -1.0
558,196 - 14696 mRNA_6328 0.25 0.2