Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6311

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6310: 14678 - Hypothetical Protein, at 504163 to 504987 14678 mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505082 to 507881 14679 mRNA_6312: 14680 - K10754 RFC1 replication factor C subunit 1, at 508348 to 511991 14680

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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504,156 + -0.6
504,585 + 14678 mRNA_6310 0.51 -0.5
504,974 + 0.1
505,083 + 0.3
505,161 - -0.5
505,554 + 14679 mRNA_6311 0.17 0.7
505,649 + 14679 mRNA_6311 0.20 0.7
505,716 + 14679 mRNA_6311 0.23 0.9
506,545 + 14679 mRNA_6311 0.52 -2.1
506,848 - 14679 mRNA_6311 0.63 0.0
507,690 - -0.2
507,966 + 0.8
507,979 + 0.7
507,982 - 1.3
508,104 - -0.3