Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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332,817 - 1.4
332,910 - -0.2
333,145 + -0.6
333,148 - -0.1
333,174 + -0.6
333,260 + 0.3
333,304 - 0.5
333,305 + -0.6
333,315 + -0.3
333,342 - 2.0
333,344 - 0.6
333,354 - 0.8
333,356 + 1.0
333,436 - 0.3
333,469 - -0.9
333,495 + -1.5
333,508 + -0.3
333,557 + 0.8
333,565 + 0.3
333,573 - 0.3
333,578 - -0.2
333,580 - -0.1
333,584 - 0.7
333,590 - 0.1
333,592 - 0.1
333,594 - -0.6
333,600 - -0.8
333,602 + -0.9
333,604 + -0.1
333,606 + -0.1
333,607 + -0.1
333,613 - 0.4
333,619 - -1.3
333,623 - 1.5
333,629 + -0.5
333,629 + 1.9
333,629 + -0.1
333,633 - 0.9
333,643 - 0.1
333,646 + -0.3
333,771 - -0.5
333,772 - -0.4
333,782 - -0.6
333,800 + -0.2
333,808 - -0.1
333,951 - 14609 mRNA_6241 0.22 -1.2
333,961 + 14609 mRNA_6241 0.23 0.4
333,963 + 14609 mRNA_6241 0.24 -0.3
333,976 - 14609 mRNA_6241 0.25 1.6
334,089 + 14609 mRNA_6241 0.36 -0.7
334,104 - 14609 mRNA_6241 0.38 -0.4
334,114 + 14609 mRNA_6241 0.39 -0.4
334,261 + 14609 mRNA_6241 0.54 0.1
334,402 + 14609 mRNA_6241 0.69 0.0
334,534 - 14609 mRNA_6241 0.82 -0.1
334,682 + 2.4
334,682 - 1.0
334,705 + 1.5
334,938 + 0.2
335,105 - 0.2
335,214 + -0.6
335,268 - -0.0
335,289 - 0.5
335,292 + -0.4
335,384 + -0.3
335,432 - 1.0
335,433 + 0.0
335,494 + -0.6
335,574 - 14610 mRNA_6242 0.10 0.2
335,597 + 14610 mRNA_6242 0.11 0.4